5
votes
Accepted
Kallisto error: index input file could not be opened!
Usually errors like these occur when an input file doesn't exist or is corrupt. But you might also see these errors if you don't have permissions to access the file for whatever reason. Although ...
- 3,148
4
votes
Accepted
Bioconductor Conda release delay
I started the roll-out on the 30th in the evening. There's not much of a delay for the October Bioconductor release, but for the summer release we first have to build the newest R version and then ...
- 19.8k
2
votes
Why can I not install snakemake on my SLURM computer even though I can find it in the bioconda channel?
I created a file .condarc in my home directory with the following content:
channels:
- conda-forge
- bioconda
- defaults
and it works now. I don't ...
- 2,479
1
vote
cmapPy exception
The error I see is,
UnicodeDecodeError: 'charmap' codec can't decode byte 0x90 in position
2440: character maps to
This suggests there is an error in the input format that the program doesn't like.
...
M__♦
- 12.8k
1
vote
UCSC packages/tools ucsc-netchainsubset and ucsc-fatotwobit not working on GNU/Linux
Short answer: respect the case of the tool name
Longer story below
Thanks to terdon, I printed the PATH when the conda environment was active and listed what was in the folder where conda installed ...
- 2,479
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