New answers tagged bash
3
votes
MiXCR: only create a single export file for all clonotypes
Currently in MiXCR SERIES 4 you can use --dont-split-files parameter here.
Please check our new documentation portal:
https://docs.milaboratories.com/mixcr/...
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2
votes
Accepted
How to remove empty files from a directory?
This isn't the most efficient approach, using find will be easier and faster as long as your find supports the ...
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2
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How to remove empty files from a directory?
As already stated, one way is to use the GNU find (the default on Linux) command. This will find and print all empty files in the current directory:
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1
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How to rename a file based on a directory name?
Perl one-liner:
ls */filename | perl -lane 'print "mv $1/$3 $1/$2_$3" if /(\S+_([^\/_\s]+))\/(\S+)/'
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1
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How to remove empty files from a directory?
@Ram RS has identified the solution here via find, if that does not work then the following will work,
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M__♦
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3
votes
How to remove empty files from a directory?
Always Google before asking on forums. I googled "delete empty files linux" and this was the second result: https://www.baeldung.com/linux/delete-empty-files-dirs
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3
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How to rename a file based on a directory name?
Assuming the output is only a list of directories and each directory includes a file called "ragtag.scaffold.fasta", you could use brace expansion to generate the SOURCE and DEST strings:
<...
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3
votes
Accepted
How to rename a file based on a directory name?
Just execute the following immediately above the directories of interest, (post edited to include OPs "constant term")
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M__♦
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