New answers tagged batch-effects
1
vote
Accepted
Can I Incorporate svaseq() into GSEA/GSVA analysis?
Use removeBatchEffects from limma. The input counts should be on log scale, so vst and ...
Top 50 recent answers are included
Related Tags
batch-effects × 27rna-seq × 13
r × 7
combat × 6
scrnaseq × 4
deseq2 × 4
limma × 4
sva × 4
microarray × 3
seurat × 2
statistics × 2
single-cell × 2
normalization × 2
edger × 2
bioconductor × 1
differential-expression × 1
clustering × 1
quality-control × 1
pca × 1
heatmap × 1
data-preprocessing × 1
gsea × 1
imputation × 1
design × 1
tpm × 1