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2 votes

Extract specific nucleotide base position for query and subject from text file

Usually, when you run your BLAST alignment you specify the output format (e.g. as described in "outfmt" in
2 votes

Given a FASTA file with a set of genes, how do I determine that set's conservation among a genetic order?

It's possible that MOLE-BLAST could help for you: MOLE-BLAST is an experimental tool that helps taxonomists find closest database neighbors of submitted query sequences. It computes a multiple ...
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5 votes

Gene symbol list for all protein coding genes in mice

If you want all known mouse protein coding genes, you can get the list from Ensembl's BioMart. First, select the mouse genome: Then, in "Filters" limit to protein coding genes only: And ...
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