New answers tagged clustering
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How long should it take to cluster Uniref?
The mmseqs2 code should be specifically compiled and optimised for your system. mmseqs2 optimisation is automated and might be available via Spack* (I'm not sure its actually done for mmseqs2), it is ...
M__♦
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How long should it take to cluster Uniref?
When I want to estimate the time taken to do something big, I subset my input data to something that takes a few minutes or less, and calculate forward from there. If there's alignment involved, it's ...
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