2 votes

How to get separate histograms plots on the basis of the column value?How to detect which plot has most deviation?

You could use the groupby() pandas function to group the dataframe by gene name. And then just loop through each group to plot the histogram of correlation values. I think you can use the mean of the ...
Steve's user avatar
  • 3,059
1 vote

I am trying to find correlation between two ChIP-seq datasets but the Pearson and Spearman test results do not correspond with the peak overlap

Correlations like this between ChIP-seq datasets is common. If you're calculating the correlation between BAM files across the entire genome, those are largely going to be the same (hence the need for ...
James Hawley's user avatar
  • 1,374

Only top scored, non community-wiki answers of a minimum length are eligible