2 votes

obtaining a fragment data file bed from bam

There's an example in the README (https://github.com/epifluidlab/cragr#example-datasets): For you information, below are steps from the BAM file to the fragment file: ...
jared_mamrot's user avatar
1 vote

Statistical approach to link DNA methylation with toxic element exposure and health outcome

Having given some thought to this, I'd still use machine learning. I would attempt to augment the negative controls however. Is there a suitable published data set? R program is caret but it high ...
M__'s user avatar
  • 12.1k
1 vote

Mendelian randomization

I understand linkage disequilibrium (LD) versus panmixia, which the technical term for Mendelian randomisation and for humans PLINK is a population package. The best outcome is a correlation between ...
M__'s user avatar
  • 12.1k

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