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Multi Factor in Deseq2 Gene enrichment analysis

If you don't tell DESeq what contrast to make, it just does the default contrast. Which is your reference versus the last other one alphabetically.
swbarnes2's user avatar
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After running nf-core, is there a way to map a gene_id to a specific gene's DNA sequence?

fishing out tp53 RNA-Seq reads go to NCBI Taxonomy Browser put Anas platyrhynchos as a search term click on Anas platyrhynchos ...
darked89's user avatar
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2 votes

Featurecount output .txt file from bam file

The first 6 column in standard featureCounts output represent what is in the column names. All columns after than (starting at 7) represent the counts for the sample(s). If you use a single bam file ...
ATpoint's user avatar
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