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1 vote

Multi-pattern search in aligned sequences

Maybe a job for seqkit locate. Here -m 0means no mismatches allowed. I do not understand really your output format, so maybe ...
ATpoint's user avatar
  • 1,430
1 vote

Multi-pattern search in aligned sequences

I wonder if FIMO might be something that you could use. The online version doesn't have the capacity 70 deal with 700GB of data, but you could try it out with a subsample to see if the output is ...
Laura's user avatar
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