Hot answers tagged

4 votes

How can I install bioconductor-gviz and use it in jupyter notebook?

# Install the BiocManager package first install.packages("BiocManager") library("BiocManager") # Then install the Gviz package BiocManager::install("Gviz")
Aedin's user avatar
  • 156
3 votes
Accepted

How can I install bioconductor-gviz and use it in jupyter notebook?

Did you try following the installation instructions? Try this in R: source("https://bioconductor.org/biocLite.R") BiocInstaller::biocLite(c("Gviz"))
Jared Andrews's user avatar
3 votes

R help in Jupyter notebook?

If you launch like docker run -p 8888:8888 jupyter/r-notebook you will get the help page like a widget and a warning in your cell output. Check your browser, maybe ...
zorbax's user avatar
  • 769
2 votes

Number of edges in Graphical Analysis using Jupyter with Go Programming language

the dot file in the Git repo has 6646 edges, the pajek file in your link has 7182. Chances are the latter has been updated since.
Bastian Schiffthaler's user avatar
2 votes

How to run Jupyter script on Slurm HPC

This is a bash script (#!/bin/bash) and you try to run python in it. You should save your python script (e.g. in "myscript.py") and call it within your bash script. Maybe first try to see if ...
jeremy's user avatar
  • 143
2 votes

Raw Data frame manipulation in python

...
M__'s user avatar
  • 12.1k
1 vote

Visualize RNA co-folded secondary structure with Python

... . I know both aspects of this question and I'm not aware of an interactive Python package using e.g. iPython magic commands that will do this. The thing you could try is ...
M__'s user avatar
  • 12.1k
1 vote
Accepted

Running a list of apis via Python's request module

...
M__'s user avatar
  • 12.1k
1 vote

R help in Jupyter notebook?

I met the same problem. R after v4.1.1 seem to have problems with repr_html. I fixed the problem by following the quotes. This tiny commit solves a long standing ...
Akiyama's user avatar
  • 11
1 vote

How can I install bioconductor-gviz and use it in jupyter notebook?

Use BiocManager::install() ...
Alex Yahiaoui Martinez's user avatar

Only top scored, non community-wiki answers of a minimum length are eligible