2
votes
Accepted
How to build advanced boxplots from datasets which columns contain only numbers?
To coerce your data into a form interpretable by ggplot2, you can use the gather function from ...
- 443
1
vote
"Error in col2rgb(colors, alpha = TRUE) : invalid RGB specification" when running HeatmapAnnotation() (from ComplexHeatmap)
Looking at the documentation, it seems that HeatmapAnnotation expects a vector, whereas you are giving it a list. It is not clear on what acceptable color types are....
- 2,547
1
vote
baseMean threshold
Adding my answer from the crosspost:
I would not use the baseMean for any filtering as it is (at least to me) hard to deconvolute. You do not know why the baseMean is low, either because there is no ...
- 2,706
1
vote
Wrapping R scripts in WDL and run in docker
In order to reference a WDL input within a command block you need to use an expression placeholder. Expression placeholders have the form ~{*wdl expression*}, where ...
- 171
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