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2 votes

How to know if FASTQ/BAM is from reference genome (FASTA)?

In general, this answer wouldn't be more correct than @Ram RS' answer but here is how I would approach: I would start everything from scratch, at the end of the day you will most probably need to ...
haci's user avatar
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3 votes

How to know if FASTQ/BAM is from reference genome (FASTA)?

Your post has multiple questions but one of them is not really a question so I'll address everything here: 1. "Some of them could be contaminants, so I'd like to filter them out and get only the ...
Ram RS's user avatar
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