New answers tagged

1 vote

Simulating 3' end tag-based scRNA-seq reads

Looks like a couple options have become available: Minnow: article code scReadSim: preprint code
user avatar
  • 561
2 votes
Accepted

how to calculate the expression values per gene for all cells

No Seurat function is needed. In the seurat object "cells", you can access the raw counts or normalized counts using cells@assays$RNA@counts (raw counts) ...
user avatar
  • 319

Top 50 recent answers are included