1
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Sequence Alignment for sequences with the same length
I see ... the application is if two genes had the same number of indels* at different homologous positions within the gene. This happens but equally one gene might have an indel and another gene might ...
M__♦
- 11.9k
1
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How does the BWA-MEM algorithm assign its mapping qualities?
The MAPQ score appears to be calculated in the mem_approx_mapq_se function. I tried porting it to Python and inserting comments using ChatGPT 4, though I haven't tested it to ensure the output is ...
- 111
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