charlesdarwin
  • Member for 4 years, 6 months
  • Last seen more than 1 year ago
1 answers
1 votes
28 views
1 bookmarks
How can I run the fdnadist command from the EMBOSS package?
0 answers
0 votes
64 views
1 bookmarks
Is there an option in Orthofinder to choose the output directory name?
3 answers
2 votes
185 views
What assembler is appropriate for High-Fidelity PacBio reads
1 answers
2 votes
182 views
How can I not show insertions in the Integrative Genome Viewer (IGV)?
2 answers
2 votes
258 views
How can I transform a mapped BAM file into an unmapped BAM file?
1 answers
0 votes
124 views
What is the `table` parameter in the UCSU ldHgGene tool?
1 answers
0 votes
144 views
UCSC packages/tools ucsc-netchainsubset and ucsc-fatotwobit not working on GNU/Linux
1 answers
5 votes
479 views
How can I ask snakemake to produce a dag where each node represents a rule?
1 answers
2 votes
226 views
BUSCO does not find buscos in reference sequence of C. elegans (technical problem)
2 answers
2 votes
2k views
How to use busco installed through conda?
1 answers
0 votes
344 views
How do I tell featureCounts to ignore fragments that overlap with more than one feature?
1 answers
1 votes
185 views
How can I specify an email address in the SLURM snakemake json configuration file?
1 answers
2 votes
120 views
Why can I not install snakemake on my SLURM computer even though I can find it in the bioconda channel?
4 answers
3 votes
211 views
Purpose of ### (3 consecutive pound signs / hashtags / octothorps) in GFF3
1 answers
4 votes
264 views
Can blat use more than one core/CPU to speed up the alignment?
1 answers
2 votes
101 views
hgsql not found when running a script despite being accessible on command-line
1 answers
1 votes
128 views
Accessing UCSC genome via ssh results in a validation error
0 answers
5 votes
58 views
Why does repeatmasker annotate transposons of length 1?
1 answers
3 votes
3k views
How to transform a DNAStringSet from the Bioconductor package Biostrings to a data frame?
1 answers
0 votes
167 views
Find a map/correspondence between two versions of a genome
0 answers
2 votes
182 views
1 bookmarks
RATT works on example bacterial sequence and other bacterial genome but not on C. elegans genome and annotation
1 answers
0 votes
1k views
How to uninstall hmmpress from my conda environment?
0 answers
1 votes
92 views
Detect gene duplication events from a whole genome in FASTA format
1 answers
0 votes
257 views
GMAJ error: Exception in thread "main" java.lang.ClassCastException: java.lang.StringBuffer cannot be cast to java.lang.String
1 answers
3 votes
68 views
TRAL does not find "Phobos result file"
0 answers
2 votes
50 views
What is tRNAscan-SE bit score?
4 answers
5 votes
2k views
tRNAscan-SE error: FATAL: Unable to find /usr/local/bin/cmsearch executable
1 answers
3 votes
251 views
Error in seq.default in chromPlot
1 answers
1 votes
125 views
How to superimpose barplots in karyotype graphic using the chromPlot Bioconductor package?
3 answers
6 votes
6k views
How do I rename fasta headers?