charlesdarwin
  • Member for 4 years, 6 months
  • Last seen more than 1 year ago
3 answers
6 votes
6k views
How do I rename fasta headers?
4 answers
8 votes
6k views
3 bookmarks
What are the pros and cons of the different basecallers in Oxford Nanopore Technology Sequencing?
1 answers
2 votes
4k views
How to download the whole BLAST nt database into a specific folder?
1 answers
1 votes
4k views
Set directory where MinKNOW writes FAST5 files
1 answers
3 votes
3k views
How to transform a DNAStringSet from the Bioconductor package Biostrings to a data frame?
1 answers
2 votes
3k views
Can I index a compressed FASTA file using STAR?
2 answers
4 votes
2k views
Can I stop my nanopore sequencing run if there are no more reads being produced?
2 answers
2 votes
2k views
How to use busco installed through conda?
1 answers
4 votes
2k views
Can I run STAR without an annotation file?
4 answers
5 votes
2k views
tRNAscan-SE error: FATAL: Unable to find /usr/local/bin/cmsearch executable
1 answers
0 votes
1k views
How to uninstall hmmpress from my conda environment?
1 answers
3 votes
1k views
How many reads has my sequencing run produced on minion?
3 answers
8 votes
1k views
Why does cutadapt remove low quality bases from the ends of reads only?
2 answers
2 votes
968 views
What software/tool can I use to visualise a multiple sequence alignment in the xmfa format as produced by command-line tool Mauve?
1 answers
2 votes
955 views
Albacore wheel not supported on this platform (Mac OS X El Capitan)
2 answers
4 votes
729 views
GATK CombineVariants complains the contig order in the VCF files
1 answers
3 votes
693 views
Does MinKNOW work with Mac OSX high sierra 10.13.1?
1 answers
2 votes
602 views
Can I pilon-polish long reads with Illumina short reads to improve structural variant detection?
1 answers
2 votes
542 views
What to do with the configuration test cell after configuring the MinION with it?
1 answers
2 votes
491 views
How to download the whole directory of an ensembl FTP page?
1 answers
5 votes
479 views
How can I ask snakemake to produce a dag where each node represents a rule?
2 answers
2 votes
476 views
Java error when launching Pilon
1 answers
2 votes
425 views
Can I export the SNPs between whole genome alignments using the command line?
2 answers
5 votes
387 views
Can I use my computer while MinION is sequencing without negatively affecting the run?
1 answers
0 votes
376 views
Why is my STAR reference genome indexing aborting on my GNU/Linux server but not on my Mac OS X laptop?
1 answers
0 votes
344 views
How do I tell featureCounts to ignore fragments that overlap with more than one feature?
2 answers
2 votes
320 views
seqret error when trying to transform GFF3 and FASTA files into EMBL format
1 answers
5 votes
278 views
Why doesn't Biopython AlignIO.read() recognise the 'mauve' format?
1 answers
4 votes
264 views
Can blat use more than one core/CPU to speed up the alignment?
2 answers
2 votes
258 views
How can I transform a mapped BAM file into an unmapped BAM file?