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Why does it require 4 vectors to calculate a torsion angle?

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Are the information stored in the PBD files in the protein data bank complete or incomplete?

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25 views

What is DSSP algorithm for?

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Can I traverse/enumerate PDB one at a time using a Python script without downloading all of them to my local disk?

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What is the difference between Assignment and Prediction?

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2 votes

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How are tertiary protein structures represented in computers?

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What is coarse-grained modeling of proteins?

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1 vote

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Can Bioinformatics be used in developing a marketable product? [closed]

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1 vote

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What is the basic difference between a protein and a ligand?

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asked Jun 12 at 21:07

1 vote

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How can I calculate the radius of a residue?

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asked yesterday

1 vote

1 answer

18 views

What do these characters mean in a PDB file?

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1 vote

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How can I parse alternative atom information?

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How can I calculate the distances between two specific residues of a protein from a PDB file?

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1 vote

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Is "Assignment" a part of the "Prediction" process? [duplicate]

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1 vote

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How can I programmatically add a Hydrogen 'Atom' to a 'Residue' object?

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1 vote

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What is the cutoff distance in this algorithm?

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1 vote

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How can I list all amino acids in a protein using PyMOL?

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How to represent a summary of disagreement between two secondary structure predictors given predictions for many proteins?

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0 votes

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How can I draw a diagram of hydrogen bonds only on the basis of C-alpha backbone?

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0 votes

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What does it mean by "PC" in this article?

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Unable to execute DSSP algorithm from BioPython

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asked Sep 18, 2021 at 15:57

0 votes

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What does the following diagram represent?

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asked Aug 22, 2021 at 4:33

0 votes

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17 views

Why does it require four vectors to calculate a torsion angle? [duplicate]

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asked Oct 10, 2021 at 20:12

0 votes

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How can I calculate the distance w.r.t. a beta sheet?

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0 votes

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How can I get a list of neighboring Hydrogen atoms of an alpha-carbon?

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0 votes

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0 votes

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Interlink among different length scales of simulation and modelling techniques

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What does it mean by "topology" in the case of secondary and tertiary structures of proteins?

proteins

asked May 22 at 17:45

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30 Questions

Why does it require 4 vectors to calculate a torsion angle?

Are the information stored in the PBD files in the protein data bank complete or incomplete?

What is DSSP algorithm for?

Secondary structure assignment tool

Can I traverse/enumerate PDB one at a time using a Python script without downloading all of them to my local disk?

What is the difference between Assignment and Prediction?

How are tertiary protein structures represented in computers?

What is coarse-grained modeling of proteins?

Can Bioinformatics be used in developing a marketable product? [closed]

What is the basic difference between a protein and a ligand?

How can I calculate the radius of a residue?

What do these characters mean in a PDB file?

How can I parse alternative atom information?

How can I calculate the distances between two specific residues of a protein from a PDB file?

Is "Assignment" a part of the "Prediction" process? [duplicate]

How can I programmatically add a Hydrogen 'Atom' to a 'Residue' object?

What is the cutoff distance in this algorithm?

How can I list all amino acids in a protein using PyMOL?

How to represent a summary of disagreement between two secondary structure predictors given predictions for many proteins?

How can I draw a diagram of hydrogen bonds only on the basis of C-alpha backbone?

What does it mean by "PC" in this article?

Unable to execute DSSP algorithm from BioPython

What does the following diagram represent?

Why does it require four vectors to calculate a torsion angle? [duplicate]

How can I calculate the distance w.r.t. a beta sheet?

How can I get a list of neighboring Hydrogen atoms of an alpha-carbon?

How can I programmatically add Hydrogen to a PDB structure using BioPython?

How can I identify acceptor and donor atoms using BioPython?

Interlink among different length scales of simulation and modelling techniques

What does it mean by "topology" in the case of secondary and tertiary structures of proteins?