User Emily_Ensembl

9 votes

BiomaRt error: Error in martCheck

answered Nov 7, 2017 at 9:05

8 votes

Can exons be located outside of the coding sequence?

answered Oct 20, 2017 at 7:57

8 votes

Accepted

Why are some of the gene peptides returned by biomaRt missing an asterisk in the end?

answered Aug 16, 2017 at 8:49

8 votes

Accepted

Is there any difference between SNPs 'AG' and 'GA' in association analyses?

answered Aug 22, 2017 at 7:53

7 votes

Accepted

How to represent a deletion at position 1 in a VCF file?

answered Sep 6, 2017 at 14:07

7 votes

Retrieve detailed gene descriptions

answered Oct 16, 2017 at 9:44

5 votes

Accepted

Protein sequence from patient data

answered May 16, 2018 at 8:30

5 votes

Accepted

How can I identify a recessive and dominant gene?

answered Dec 12, 2018 at 11:45

5 votes

Why the gene symbol aliases have significantly different sequences?

answered Jul 14, 2021 at 11:57

4 votes

Variant vs Allele vs SNP

answered Sep 17, 2021 at 7:19

4 votes

How to identify the DNA sequence of a gene in the complete genome sequence FASTA format file?

answered Jun 9, 2021 at 10:00

4 votes

Accepted

Is it possible to obtain RefSeq transcripts from Ensembl database for GRCh37 to match Ensembl Genes?

answered Jan 21, 2020 at 15:44

4 votes

Ensembl protein identifiers from different assemblies

answered Feb 4, 2020 at 14:43

4 votes

Accepted

different results coming from biomart online and biomaRt R library

answered Nov 9, 2018 at 9:18

4 votes

Accepted

Getting species from ensembl sequence id

answered Sep 26, 2019 at 7:47

4 votes

Accepted

Python API for working with ENSEMBL genomes

answered Aug 6, 2018 at 15:35

4 votes

Accepted

Are gene names same across species?

answered Aug 8, 2018 at 8:03

4 votes

Accepted

Keep Format and Individual fields when annotating VCF with VEP

answered May 1, 2018 at 7:49

4 votes

Retrieval of genomic position by using biomaRt package

answered Mar 29, 2018 at 8:49

4 votes

Accepted

What does 'Human Alternative sequence Gene' mean in Ensembl?

answered Nov 24, 2021 at 9:19

3 votes

Accepted

1000 genomes missing SNPs on chr X in GRCh38

answered Sep 18, 2019 at 13:10

3 votes

Accepted

Understanding SNP coding for association analysis

answered Sep 23, 2018 at 6:46

3 votes

Associating SNP and GENE

answered Jul 9, 2018 at 7:47

3 votes

Accepted

Where can I get ensembl Medaka genome for RNAseq

answered Nov 21, 2019 at 13:13

3 votes

Accepted

Retrieve all genes for a specific gene ontology

answered Nov 8, 2018 at 9:27

3 votes

VEP output SIFT_score unclear

answered Apr 10, 2019 at 10:05

3 votes

Converting gene symbols between species

answered Jun 17, 2021 at 7:45

2 votes

Accepted

How do population genetics people define a population?

answered Sep 27, 2018 at 8:31

2 votes

Find specific functional genes from a list?

answered Apr 3, 2018 at 8:33

2 votes

HG19 Position meaning

answered Nov 23, 2021 at 14:24

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40 Answers

BiomaRt error: Error in martCheck

Can exons be located outside of the coding sequence?

Why are some of the gene peptides returned by biomaRt missing an asterisk in the end?

Is there any difference between SNPs 'AG' and 'GA' in association analyses?

How to represent a deletion at position 1 in a VCF file?

Retrieve detailed gene descriptions

Protein sequence from patient data

How can I identify a recessive and dominant gene?

Why the gene symbol aliases have significantly different sequences?

Variant vs Allele vs SNP

How to identify the DNA sequence of a gene in the complete genome sequence FASTA format file?

Is it possible to obtain RefSeq transcripts from Ensembl database for GRCh37 to match Ensembl Genes?

Ensembl protein identifiers from different assemblies

different results coming from biomart online and biomaRt R library

Getting species from ensembl sequence id

Python API for working with ENSEMBL genomes

Are gene names same across species?

Keep Format and Individual fields when annotating VCF with VEP

Retrieval of genomic position by using biomaRt package

What does 'Human Alternative sequence Gene' mean in Ensembl?

1000 genomes missing SNPs on chr X in GRCh38

Understanding SNP coding for association analysis

Associating SNP and GENE

Where can I get ensembl Medaka genome for RNAseq

Retrieve all genes for a specific gene ontology

VEP output SIFT_score unclear

Converting gene symbols between species

How do population genetics people define a population?

Find specific functional genes from a list?

HG19 Position meaning