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Bioinformatics
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ShanZhengYang
  • Member for 7 years, 4 months
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question
16
R package development: How does one automatically install Bioconductor packages upon package installation?
Jan 22, 2018
question
13
Given a VCF of a human genome, how do I assess the quality against known SNVs?
May 20, 2017
question
11
Converting a VCF into a FASTA given a reference with Python, R
Nov 12, 2017
question
9
Tools to do VCF to MAF and MAF to VCF conversion?
Jan 27, 2018
question
8
What is the standard way to work with a diploid reference genome? Complementary strands?
Jun 24, 2017
question
8
How to manipulate a reference FASTA or bam to include variants from a VCF?
Aug 6, 2017
question
8
Extracting the CIGAR string from a BAM via Python?
Mar 9, 2018
question
7
How to concatenate "by chromosome"-VCFs?
Jan 14, 2018
question
7
Is there a way to retrieve several SAM fields faster than `samtools view | cut -f`?
Aug 22, 2017
question
7
What motif finding software is available for multiple sequences ~10Kb?
Jun 8, 2017
Top network posts
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186
How to compare two different commits on the same branch in github?
166
How to `wget` a list of URLs in a text file?
61
How to select a range of values in a pandas dataframe column?
54
What does the /= operator mean in Python?
50
How to translate "bytes" objects into literal strings in pandas Dataframe, Python3.x?