User Anna1364 - Bioinformatics Stack Exchange

Anna1364

Member for 5 years, 10 months
Last seen more than a week ago

Germany

Network profile

15 Questions

Score Activity Newest Views

7 votes

1 answer

2k views

dividing genome into non-overlapping windows using R

asked Nov 24, 2017 at 5:25

4 votes

1 answer

95 views

replacing SNPs with missing calls with a specific string

asked Dec 24, 2017 at 2:33

4 votes

1 answer

190 views

Find intervals that genes fall within their range

asked Jun 17, 2019 at 18:51

3 votes

3 answers

825 views

How can I find the chromosomal location of a list of genes?

asked Apr 24, 2018 at 18:49

3 votes

1 answer

73 views

How can I assign a genomic region into a window using R?

asked Mar 7, 2019 at 16:28

2 votes

1 answer

152 views

how to count the number of each allele of CNVs?

asked Jan 1, 2018 at 6:09

2 votes

0 answers

104 views

how to plot LD between SNPs and CNVs

asked Jan 8, 2018 at 5:02

2 votes

3 answers

92 views

assigning different characters to present and absent genes from blast output using perl or python

asked Feb 12, 2018 at 4:03

2 votes

2 answers

869 views

Use paste function with apply families

asked Nov 20, 2017 at 18:45

2 votes

2 answers

91 views

counting individuals with the present gene and absent gene for each population

asked Apr 2, 2018 at 19:00

1 vote

1 answer

519 views

running a samtools command for multiple bam files from 1000 genomes project

asked Apr 23, 2018 at 20:26

1 vote

4 answers

557 views

Convert population allele count into population allele frequency by using Perl or Python (translate available Bash into Perl or Python)

asked Nov 7, 2017 at 5:03

1 vote

1 answer

42 views

storing SNPs in the genotype file for each chromosome in a separate file

asked Oct 10, 2019 at 0:22

1 vote

0 answers

29 views

How can I develop a snakemake rule for all files in multiple directories?

asked Sep 15 at 0:25

0 votes

2 answers

66 views

Identifying outlier loci in R

asked Feb 27, 2018 at 23:14