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Iakov Davydov

Postdoc in Bioinformatics. Working on codon models of positive selection and their computational efficiency.

Using: Python, Bash, R, Go a bit of C and C++.

Doing machine learning for fun.

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  • Lausanne, Switzerland
  • idavydov
  • idavydov
  • Member for 2 years, 6 months
  • 29 profile views
  • Last seen Nov 1 at 9:03

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Top posts (28) All Questions Answers | Votes Newest

23 How to version the code and the data during the analysis? May 18 '17
16 What's the difference between VCF spec versions 4.1 and 4.2? Jun 1 '17
15 How to compute RPKM in R? May 17 '17
14 How to convert species names into common names? Jun 8 '17
12 What is the best way to account for GC-content shift while constructing nucleotide-based phylogenetic tree? May 18 '17
12 Is it possible to perform MinION sequencing offline? May 31 '17
11 State of the art mutation simulation software Dec 8 '17
9 How can I build a protein network pathway from a gene expression quantification file? Jun 8 '17
8 How to compute RPKM in R? May 17 '17
7 How can we find the distance between all residues in a PDB file? Jun 16 '17
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