swbarnes2's user avatar
swbarnes2's user avatar
swbarnes2's user avatar
swbarnes2
  • Member for 6 years, 2 months
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3 votes
Accepted

Multi Factor in Deseq2 Gene enrichment analysis

-1 votes

problem with feature counts of RNA bulk seq paired data- in Rsubread

3 votes

How to handle technical replicates in cellranger count?

3 votes

How can I detect the Apo B gene mutations in my raw dna data?

1 vote

mapping nucleotide sequences

1 vote

RNAseq alignment: best practices for aligning to multiple isoforms?

1 vote

How to make bar bigger in UpsetR plot

2 votes

From RNA-seq raw counts to normalized data

1 vote

Gene expression changes in one condition

1 vote

How can to validate the presence of a certain type of cells in a single cell dataset?

1 vote

Expression analysis of miRNAs with normal RNA-seq data without small RNA-seq data

1 vote

How to extract DNA sequence from browser track input files (BigWig, bed etc.) files

0 votes

BAM files with no RNAME and POS, how to map contents to SNPs?

2 votes

What is the best way to compare differences in DEG expression between two populations?

2 votes

Plotting a gene in Seurat

1 vote

Find the genomic locations of exons of certain human gene

1 vote

How to input data and metadata from NCBI for RNA-Seq analysis in R

1 vote

Best R program to use for RNA seq analysis

-1 votes

I have two fasta files READ1 and READ 2. How to identify which one is the reverse and the forward?

1 vote

Help with performing PCA analysis on data from 3 different datasets of normalized counts data for RNA-seq experiment

0 votes
Accepted

Understanding the different designs in DESeq2

1 vote

DEseq2 contrast in two time points

0 votes
Accepted

Why does my volcano plot show genes at the extremities of the graph?

1 vote

Are variant calling files personally identifiable information?

1 vote
Accepted

Getting conventional gene symbol for Seurat

1 vote

Get frequency of index sequences of fastq file

1 vote

DESeq2 multiple treatments, multiple time points, multiple cell lines

1 vote

What are common ways to calculate gene length for TPM calculations?

0 votes

How to input the opposite strand of DNA?

0 votes

Normalize RNA seq data from multiple runs for expression analysis