Bioinformatics
The Unfun Cat's user avatar
The Unfun Cat's user avatar
The Unfun Cat's user avatar
The Unfun Cat
  • Member for 5 years, 7 months
  • Last seen more than a month ago
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Get your piping hot GenomicRanges for Python here https://github.com/biocore-ntnu/pyranges

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All Questions Answers
Score Newest
answer
7
How to do `bedtools intersection` using pandas alone?
Oct 23, 2019
answer
4
Create new range based from existing range (python)
Feb 24, 2021
answer
3
How can I use pandas agg here to avoid iteration?
Feb 24, 2021
answer
3
How to convert BAM file to bigWig in Python?
Feb 28, 2021
answer
2
How to subset genes and its nested features from a GFF file using a gene list
Mar 2, 2021
answer
2
Assign score to PyRanges from another PyRanges object
May 17
answer
2
Efficiently iterate over bed and subset pyranges objects
Nov 1, 2019
answer
1
Range overlap python error with genomic regions
Oct 29, 2019
answer
1
ATAC-seq macs2 peak splitting in sliding windows
Oct 29, 2019
answer
1
Create new range based from existing range (python)
Mar 1, 2021
Top network posts
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553
How to iterate over columns of a pandas dataframe
308
Is it possible to ignore one single specific line with Pylint?
189
Replacing instances of a character in a string
175
Counting non zero values in each column of a DataFrame in python
164
How do I add files without dots in them (all extension-less files) to the gitignore file?

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