User kcm

1 vote

2 answers

118 views

ATAC seq density calculation

asked Feb 25, 2021 at 20:33

1 vote

0 answers

40 views

Data format for pathway based clustering of samples

asked Mar 31, 2021 at 14:42

1 vote

0 answers

40 views

TGCA LAML rsem data

asked Feb 7, 2022 at 5:34

1 vote

0 answers

93 views

chip seq biological replicate merge after peak-calling

asked May 10, 2022 at 21:48

1 vote

1 answer

303 views

deseq2 full and reduced model interpretation

asked May 30, 2022 at 6:27

1 vote

1 answer

52 views

Peptide data visualization

asked Nov 17, 2021 at 10:25

1 vote

1 answer

86 views

deseq2 model design : Different gene output

asked Jun 21, 2022 at 13:13

1 vote

1 answer

61 views

deseq2 single factor design output interpretation

asked Jun 24, 2022 at 9:11

0 votes

1 answer

32 views

Same region/region but different annotation

asked Aug 28, 2021 at 11:27

0 votes

1 answer

22 views

How to match peptide sequence from two different condition

asked Nov 11, 2021 at 7:06

0 votes

1 answer

44 views

Chromatin accessibility level on promoters with different CpG ratio calculation

asked Jul 11, 2020 at 20:55

0 votes

1 answer

88 views

europmc and tidypmc R library for extracting or making metadata from publication

asked Jul 24, 2020 at 10:38

0 votes

1 answer

352 views

Parsing the json file from gene ontology result into dataframe

asked Aug 14, 2020 at 5:23

0 votes

1 answer

547 views

Find intersection among multiple columns and find the intersected elements [closed]

asked Sep 15, 2020 at 10:18

0 votes

1 answer

197 views

Chip-seq down-sampling problem

asked Nov 20, 2020 at 7:02

0 votes

0 answers

111 views

Setting scale of profile plot from zero for chip seq profile plot

asked Dec 1, 2020 at 7:25

0 votes

0 answers

114 views

kraken2 output to OTU table

asked Jun 26, 2020 at 22:54

0 votes

1 answer

136 views

ATAC seq : Plotting insert sizes

asked Jan 6, 2021 at 10:37

0 votes

0 answers

67 views

ATAC and RNA seq Up regulated region gene and scatter

asked Jan 9, 2021 at 16:25

0 votes

1 answer

45 views

Getting two class of promoters : ATAC seq data

asked Jan 12, 2021 at 12:55

0 votes

1 answer

52 views

Multi Omics comparison RNA seq : Condition specific gene signature

asked Jan 13, 2021 at 13:03

0 votes

0 answers

64 views

Peak Specific to condition in ATAC seq data

asked Jan 18, 2021 at 7:18

0 votes

1 answer

181 views

Nanopore data clarification regarding merging of samples

asked Feb 19, 2021 at 6:33

0 votes

1 answer

53 views

Tree cut height for Consensus data input not working

asked Dec 9, 2019 at 13:27

0 votes

1 answer

86 views

gnu parallel for macs peak calling

asked Mar 2, 2020 at 10:38

0 votes

1 answer

56 views

Pol_II genome wide occupancy analysis

asked Mar 5, 2020 at 11:04

0 votes

2 answers

405 views

parsimony and maximum likelihood tree comparison in R

asked Jun 6, 2020 at 18:23

0 votes

1 answer

123 views

Calculating Synonymous and non-synonymous

asked Jun 9, 2020 at 14:02

0 votes

1 answer

496 views

Removing stop codons from alignment file for dn/ds calculation

asked Jun 12, 2020 at 8:59

0 votes

1 answer

69 views

Finding out-group in unrooted tree

asked Jun 15, 2020 at 6:56

Stack Exchange Network

112 Questions

ATAC seq density calculation

Data format for pathway based clustering of samples

TGCA LAML rsem data

chip seq biological replicate merge after peak-calling

deseq2 full and reduced model interpretation

Peptide data visualization

deseq2 model design : Different gene output

deseq2 single factor design output interpretation

Same region/region but different annotation

How to match peptide sequence from two different condition

Chromatin accessibility level on promoters with different CpG ratio calculation

europmc and tidypmc R library for extracting or making metadata from publication

Parsing the json file from gene ontology result into dataframe

Find intersection among multiple columns and find the intersected elements [closed]

Chip-seq down-sampling problem

Setting scale of profile plot from zero for chip seq profile plot

kraken2 output to OTU table

ATAC seq : Plotting insert sizes

ATAC and RNA seq Up regulated region gene and scatter

Getting two class of promoters : ATAC seq data

Multi Omics comparison RNA seq : Condition specific gene signature

Peak Specific to condition in ATAC seq data

Nanopore data clarification regarding merging of samples

Tree cut height for Consensus data input not working

gnu parallel for macs peak calling

Pol_II genome wide occupancy analysis

parsimony and maximum likelihood tree comparison in R

Calculating Synonymous and non-synonymous

Removing stop codons from alignment file for dn/ds calculation

Finding out-group in unrooted tree