User haci

6 votes

VlnPlot problem

answered Oct 19, 2018 at 21:20

6 votes

Accepted

Converting values to string

answered Jan 29, 2020 at 10:42

6 votes

Is it possible to get such a plot

answered Apr 14, 2020 at 11:57

6 votes

Nextflow - Process has already been used

answered Jun 15, 2023 at 15:47

6 votes

Accepted

Classical alignment with HISAT2

answered Dec 22, 2023 at 13:28

5 votes

How do I pull singe cell RNA sequencing data from GEO database?

answered Apr 13, 2020 at 21:21

5 votes

How to convert gff to gtf?

answered Dec 29, 2019 at 9:46

4 votes

Accepted

Moving file based on their names

answered Jan 5, 2020 at 19:34

4 votes

Accepted

Chaning string in rows

answered Jan 20, 2020 at 13:32

4 votes

Accepted

Pattern mining from a genomic sequence

answered Nov 5, 2019 at 11:09

4 votes

Accepted

How to convert mzXML to mzML format (mass spectrometry files)?

answered Nov 17, 2019 at 12:14

4 votes

How I can run this code on my files?

answered Nov 19, 2019 at 11:56

4 votes

Accepted

Creating a count table using R

answered Aug 10, 2019 at 20:35

4 votes

Accepted

how to merge more than two sample in Seurat?

answered Aug 19, 2019 at 7:11

4 votes

Accepted

Create a Grouped Barchart

answered Aug 25, 2019 at 11:23

4 votes

Changing the axis limits of ggplot objects

answered Sep 19, 2019 at 12:18

4 votes

How to load and split my two individual datasets when integrating datasets in Seurat?

answered Sep 23, 2019 at 7:53

4 votes

Error in ruuning a package in R

answered Mar 16, 2020 at 12:23

4 votes

Overlap in Paired-end Reads for Sequencing?

answered Mar 25, 2020 at 10:14

4 votes

Is it important to filter out poor quality cells before performing an integration analysis on single cell RNA sequencing data?

answered May 12, 2020 at 7:35

4 votes

Can the header line contain arbitrary text in FASTA format?

answered Jul 9, 2021 at 10:10

4 votes

ensembldb equivalent in python

answered Jul 11, 2021 at 10:07

4 votes

How do you replace multiple sequence names with new names using python?

answered Nov 19, 2021 at 12:34

4 votes

How to join multiple large .tsv (> 20 GB, bed file) files by two identifier?

answered Jun 19, 2023 at 7:04

3 votes

is it possible to count cell in Violin plot in seurat?

answered Jul 6, 2023 at 12:51

3 votes

How to measure mean of a column for every 10000 rows condition on other column?

answered Apr 11 at 19:05

3 votes

How to copy only certain counts for genes in tsv file to new file in linux

answered Sep 25, 2021 at 17:42

3 votes

Accepted

How to make a violin plot around quasirandom dots

answered Jul 11, 2022 at 17:03

3 votes

select highly variable genes out of dataframe

answered Sep 27, 2022 at 10:10

3 votes

Violin plots appear as vertical lines

answered May 11, 2022 at 17:59

Stack Exchange Network

162 Answers

VlnPlot problem

Converting values to string

Is it possible to get such a plot

Nextflow - Process has already been used

Classical alignment with HISAT2

How do I pull singe cell RNA sequencing data from GEO database?

How to convert gff to gtf?

Moving file based on their names

Chaning string in rows

Pattern mining from a genomic sequence

How to convert mzXML to mzML format (mass spectrometry files)?

How I can run this code on my files?

Creating a count table using R

how to merge more than two sample in Seurat?

Create a Grouped Barchart

Changing the axis limits of ggplot objects

How to load and split my two individual datasets when integrating datasets in Seurat?

Error in ruuning a package in R

Overlap in Paired-end Reads for Sequencing?

Is it important to filter out poor quality cells before performing an integration analysis on single cell RNA sequencing data?

Can the header line contain arbitrary text in FASTA format?

ensembldb equivalent in python

How do you replace multiple sequence names with new names using python?

How to join multiple large .tsv (> 20 GB, bed file) files by two identifier?

is it possible to count cell in Violin plot in seurat?

How to measure mean of a column for every 10000 rows condition on other column?

How to copy only certain counts for genes in tsv file to new file in linux

How to make a violin plot around quasirandom dots

select highly variable genes out of dataframe

Violin plots appear as vertical lines