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Bioinformatics Beta
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Ahmed Abdullah
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I am a molecular biology researcher. I have interested in learning some pure mathematics.

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4 How to get fasta alignment file from SAM/BAM file? Feb 17
4 Are phylogenetic tree construction algorithms any different than general clustering algorithms? Apr 9
3 How to filter blast results from blast run against virulence factor database Apr 6
2 For phylogenetic tree construction from core-genome which one is preferable: amino-acid based MSA or nucleotide based MSA? Jul 24
2 How snippy makes MSA-like aligned fasta output from multiple samples? Mar 21
1 How to apply RDP, Greengenes and other special taxonomies in Krona? Sep 3
1 What is the best argument for maximum parsimony method in phylogenetic tree construction? Apr 24
0 How to choose reference to calculate coverage of WGS of organism that has high intra-species variation? 17 hours ago
0 Python module for fetching NCBI id for a list of species Sep 5
0 What are some of the major questions pursued by the field bioinformatics? [closed] Oct 23 '18

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