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Ahmed Abdullah's user avatar
Ahmed Abdullah's user avatar
Ahmed Abdullah's user avatar
Ahmed Abdullah
  • Member for 5 years, 9 months
  • Last seen more than a month ago
7 votes
2 answers
1k views

Are phylogenetic tree construction algorithms any different than general clustering algorithms?

5 votes
3 answers
5k views

How to get fasta alignment file from SAM/BAM file?

3 votes
1 answer
430 views

How to filter blast results from blast run against virulence factor database

3 votes
1 answer
84 views

For phylogenetic tree construction from core-genome which one is preferable: amino-acid based MSA or nucleotide based MSA?

2 votes
0 answers
154 views

How to apply RDP, Greengenes and other special taxonomies in Krona?

2 votes
0 answers
224 views

How snippy makes MSA-like aligned fasta output from multiple samples?

2 votes
3 answers
336 views

What is the best argument for maximum parsimony method in phylogenetic tree construction?

1 vote
3 answers
735 views

Python module for fetching NCBI id for a list of species

1 vote
0 answers
24 views

How to choose reference to calculate coverage of WGS of organism that has high intra-species variation?

0 votes
1 answer
77 views

What are some of the major questions pursued by the field bioinformatics? [closed]