Phoenix Mu's user avatar
Phoenix Mu's user avatar
Phoenix Mu's user avatar
Phoenix Mu
  • Member for 4 years, 10 months
  • Last seen more than a month ago
8 votes

Since every human has a different DNA (different combinations of C, G, A, T) what does it mean to have the genome done?

3 votes
Accepted

GWAS, MWAS, EWAS: what are the (in)dependent variables?

3 votes
Accepted

How to perform bowtie2 analysis with slurm?

3 votes
Accepted

how to sort and join two files based on First Column Id

2 votes

Making PLINK compatible files from VCF file without phenotype information

2 votes
Accepted

Lifting from hg38 to hg37

2 votes

Is there a single cell RNAseq equivalent of GTEx or TCGA?

2 votes

Percentage of each cluster in Seurat

2 votes
Accepted

Merging based on Chromosome coordinates

2 votes

merging two/or more bed file into one bed file

2 votes

What RNA-Seq expression value would be closest to Microarray equivalent?

1 vote
Accepted

How to download RNAseq gene expression data from GTEx

1 vote

Calculating the number of probes for a given genomic range

1 vote

Generate VCF from different .bam files with different chromosome names

1 vote

How do I differentiate outliers from in-group variations in a DESeq2 PCA plot of 9 samples distributed into 3 conditions?

1 vote

What are the largest fully publicly available molecular QTL datasets?

1 vote
Accepted

How to identify latent variables in single-cell RNA-Seq data

1 vote

How to decide number of neighbors and resolution for Louvain clustering

1 vote
Accepted

How can I download the SNP genotyping information from GTEX?

1 vote

What is the difference between fixed effects and random effects in the context of Linear-mixed models?

1 vote

differential analysis of chip-seq data

1 vote

What are the state-of-the-art cell-type RNA-Seq deconvolution methods?

1 vote

Should you filter GWAS hits with high standard error?

1 vote

Hypergeometic test for the overlap of two set of genomic intervals (e.g. from Chip-seq data)

1 vote

snakemake - using output file not explicitly declared as input for subsequent rule

1 vote

Advantages of paired-end sequencing compared to single end

1 vote

Biology behind PCA analysis based on SNP

1 vote

How can I obtain a list of all NCBI gene ID's along with their full name, symbol, and also known as symbols?

1 vote

Multiple box plot

1 vote

Is there a way to do GWAS on phenotype data that is not normally distributed?