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PPK's user avatar
PPK's user avatar
PPK
  • Member for 4 years, 9 months
  • Last seen more than a month ago
6 votes
Accepted

What is the name of this type of figure?

5 votes
Accepted

TCR-seq or scRNA-seq

4 votes
Accepted

How to incorportate RIN values as covariate in the design matrix?

3 votes
Accepted

How to specifically select cluster on Featurescatter on Seurat?

3 votes
Accepted

When should I apply a multiple comparison adjustment?

2 votes

Extract end position from CIGAR

2 votes

Adding certain barcodes to metadata in Seurat

2 votes

how to merge more than two sample in Seurat?

2 votes

Low custom tdtomato gene content

2 votes

How do I select a proper design matrix to use in DRIMSeq?

2 votes

How to retrieve the subcellular location info from uniprot?

2 votes

How identifiable are human omics data and how to mitigate their identifying features?

2 votes
Accepted

Converting aligned fasta to plink ped/bed

2 votes
Accepted

Cellranger results have too many cells

2 votes
Accepted

Calculating average mito.percentage for each cluster (seurat)

2 votes
Accepted

chipseeker annotation issue

2 votes

Voom function from limma package and Normalization on counts data

2 votes

umap and Louvain clustering on normalized data

1 vote

Which format is the most raw format

1 vote

Long-form gene summary

1 vote

Are sequencing reads written differently when inserts and indexes are sequenced seperately?

1 vote

Seurat DE t.test

1 vote

Identification of starting point for the synthesis of a protein

1 vote

Within and between sample count normalization

1 vote

can I download DESeq2 in R 3.6.3 in Linux MInt?

1 vote
Accepted

Best practice to perform a functional analysis on a set of VCFs from a cohort of patients

0 votes

Gene information from chromosome location

0 votes
Accepted

After running a DRIMSeq pipeline, how do I know which genes are upregulated in the different conditions?

0 votes

What is a good RNA seq normalization method that allows for across sample comparisons and between transcripts

-1 votes
Accepted

High percentage of poly A sequences in 10X chromium R2 read