Bioinformatics
heathobrien
  • Member for 4 years, 7 months
  • Last seen more than 3 years ago
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About

I am a genome scientist using functional genomics to understand the genetic basis of disease. I code in R, Python and occasionally SQL.

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9
How to resolve in snakemake error : "Target rules may not contain wildcards."
Nov 3 '17
8
Biopython Phylogenetic Tree replace branch tip labels by sequence logos
May 22 '18
8
How to download the whole BLAST nt database into a specific folder?
Jan 8 '18
7
Script to run everything in a loop for extracting tar.gz files into fastq and to bam with alignment?
Apr 23 '18
7
What happens if a major bug is discovered in a bioinformatic package that has been used in published literature?
Nov 14 '17
6
BioMart returns one more item
Apr 16 '18
5
Generating the reconstructed alignment from BAM
Mar 1 '18
5
Software recommendation: find DNA sequence distribution over entire transcript
Sep 26 '17
5
bcftools output vs. bgzip
Nov 20 '17
4
Counting letters in phylip alignment columns with Biopython
Aug 29 '18
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5
Should we relax the requirement for disclosing affiliation on the site?
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7
Meaning of the benchmark variables in snakemake
5
BLAST Database error: No alias or index file found for nucleotide database
5
ggplot2: aspect.ratio overpowers coord_equal or coord.fixed

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