Skip to main content
Timur Shtatland's user avatar
Timur Shtatland's user avatar
Timur Shtatland's user avatar
Timur Shtatland
  • Member for 4 years, 10 months
  • Last seen more than a month ago
7 votes
Accepted

How is the GT field in a VCF file defined?

5 votes
Accepted

Telling grep to treat N as [ATCG]

5 votes

Cannot obtain alignment summary after running Bowtie2

4 votes
Accepted

How can I export a full alignment from IGV as an image?

4 votes
Accepted

Edit all the fasta headers using awk

3 votes

Method to detect genome doubling

3 votes

Error with BWA Mem input having multiple fastq files using cat and process substitution

3 votes

How I can change the name of multiple files at once in R or terminal?

3 votes

Filtering columns from large file based on a column list

3 votes
Accepted

Using python to call Emboss wordcount

2 votes
Accepted

Bedtools get fasta and ORF from a blastX run

2 votes

Produce .vcf file of ALL mutations in .bam file

2 votes
Accepted

How can I extract information from .sam files?

2 votes

How to get rows with similar values in two different columns using command line?

1 vote

BLASTn query coverage discrepancy

1 vote
Accepted

How to get matching pattern along with ID in a single command in grep?

1 vote
Accepted

Mapping statistics from bam file using bbtools and sambamba

1 vote

Quantify low complexity regions in DNA sequences

1 vote

How to copy only certain counts for genes in tsv file to new file in linux

1 vote

How to measure the total size of a fastq file in base pairs?

1 vote

how to calculate coverage of each base of mapped reads?

1 vote

How do I find unique file names without their extensions in shell script?

0 votes

Filter bam with sambamba

0 votes
Accepted

DNA seq cutting using Linux