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0x90
  • Member for 6 years, 8 months
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11 votes
1 answer
955 views

How to read and interpret a gene expression quantification file?

10 votes
4 answers
851 views

How can I build a protein network pathway from a gene expression quantification file?

9 votes
2 answers
726 views

How to import a large amount of .bed, .gff, .vcf, .paf, .sam files into an SQL database?

7 votes
3 answers
282 views

How to detect a mutation and predict its consequence?

5 votes
4 answers
276 views

How do you query and explore ENCODE data?

4 votes
4 answers
157 views

What are the standard ways to visualize protein-protein or gene-gene interactions?

4 votes
1 answer
238 views

How are PDO and PDX used in computational and predicative models for tumour biology?

4 votes
1 answer
144 views

Are there computational tools to extract features of DNA sequences?

3 votes
2 answers
923 views

How does DeepVariant construct RGB images from DNA sequences?

3 votes
0 answers
74 views

Is there a baby Hello World example using BIGstack?

3 votes
2 answers
859 views

How do you download stuff from NCBI fast? [duplicate]

3 votes
2 answers
763 views

Does this FASTQ data contain single or paired end calls?

3 votes
1 answer
41 views

How does Cellminer's "Cross-correlations of transcripts, drugs, and microRNAs" work

3 votes
2 answers
104 views

EMT/EMT-like processes in bioinformatics to study cancer progression

3 votes
2 answers
331 views

How to find/build the evolutionary history of a protein from its sequence?

3 votes
1 answer
335 views

How to simulate biological pathways?

3 votes
1 answer
261 views

How to assess the quality of assembled .fasta genome files?

3 votes
5 answers
7k views

How to create a .bed file from .fasta? [duplicate]

3 votes
0 answers
55 views

How to access XL-MS raw data and databases?

3 votes
1 answer
53 views

How to optimize the number of amplicons ordered for a PCR wet experiment with several genomic ROIs?

3 votes
0 answers
63 views

How to use hgvs to project a variant list on a given protein sequence string?

2 votes
1 answer
150 views

Are there open-sourced graph-based variant callers?

2 votes
0 answers
96 views

How to analyze and visualize CRISPR-CAS9 screening results?

2 votes
2 answers
72 views

Using data mining of papers in order to derive genomic connections [closed]

2 votes
0 answers
30 views

Working with the additional cell lines in NCI-60

2 votes
1 answer
87 views

Are there genomics databases for neurological and psychiatric disorders?

2 votes
0 answers
289 views

How to get the GO information for all the human genes?

2 votes
2 answers
4k views

How do you visualize minimap2's PAF output format?

2 votes
2 answers
198 views

How to get the genomic sequences from a blat result?

1 vote
1 answer
774 views

How to predict with the pre-trained DNABERT model?