Bioinformatics Beta
Meta user
Network profile
16,137
reputation
2
18
43

Devon Ryan♦
Moderator

Bioinformatician and data manager at the Max Planck Institute for Immunobiology and Epigenetics in Freiburg.

My background is human neurogenetics and ion channel biophysics...with a fair bit of programming as needed.

I'm one of the administrators on biostars and a moderator on the bioinformatics stackexchange.

I'm the developer of MethylDackel and pyBigWig, among others. I'm also one of the developers behind deepTools.

353
answers
1
question
~184k
people reached
  • Freiburg, Germany
  • dpryan79
  • dpryan79
  • Member for 2 years, 9 months
  • 193 profile views
  • Last seen 13 hours ago

Communities (6)

Top Meta Posts
2
19

Top network posts

Top tags (202)

Score 285
Posts 84
Posts % 24
Score 269
Posts 68
Score 191
Posts 40
Score 123
Posts 30
Score 99
Posts 22
Score 89
Posts 21
View all tags →

Top posts (354) All Questions Answers | Votes Newest

23 Convert a BAM file from one reference to another? May 16 '17
17 What is the fastest way to calculate the number of unknown nucleotides in FASTA / FASTQ files? Jun 1 '17
16 Why would someone use a CRAM instead of a BAM? Feb 26 '18
16 What is the fastest way to get the reverse complement of a DNA sequence in python? Feb 20 '18
13 Using the t-SNE algorithm on microarray data + an error bonus Sep 4 '17
13 How exactly is “effective length” used in FPKM calculated? Jun 1 '17
13 Understanding DESeq2 design, contrast and results May 19 '17
13 Merge hundreds of small BAM files into a single BAM file May 19 '17
12 Can open-source software be peer-reviewed and published? Feb 5
12 Are soft-clipped bases used for variant calling in samtools + bcftools? May 19 '17
View all questions and answers →

Badges (63)

Gold

2

Rarest

Silver

18

Rarest

Bronze

43

Rarest

View all badges →