Bioinformatics Beta
Profile Activity
Meta user
Network profile
17,622
reputation
2
20
44

Devon Ryan♦
Moderator

Bioinformatician and data manager at the Max Planck Institute for Immunobiology and Epigenetics in Freiburg.

My background is human neurogenetics and ion channel biophysics...with a fair bit of programming as needed.

I'm one of the administrators on biostars and a moderator on the bioinformatics stackexchange.

I'm the developer of MethylDackel and pyBigWig, among others. I'm also one of the developers behind deepTools.

391
answers
1
question
~273k
people reached
  • Freiburg, Germany
  • dpryan79
  • dpryan79
  • Member for 3 years, 6 months
  • 286 profile views
  • Last seen 11 hours ago

Communities (7)

Top Meta Posts
2
26

Top network posts

Top tags (212)

Score 309
Posts 94
Posts % 24
Score 289
Posts 76
Score 208
Posts 43
Score 133
Posts 31
Score 101
Posts 23
Score 91
Posts 22
View all tags →

Top posts (392)

All Questions Answers
Votes Newest
23 Convert a BAM file from one reference to another? May 16 '17
21 What is the fastest way to get the reverse complement of a DNA sequence in python? Feb 20 '18
18 What is the fastest way to calculate the number of unknown nucleotides in FASTA / FASTQ files? Jun 1 '17
17 Why would someone use a CRAM instead of a BAM? Feb 26 '18
15 How exactly is “effective length” used in FPKM calculated? Jun 1 '17
15 Are soft-clipped bases used for variant calling in samtools + bcftools? May 19 '17
13 Using the t-SNE algorithm on microarray data + an error bonus Sep 4 '17
13 Understanding DESeq2 design, contrast and results May 19 '17
13 Merge hundreds of small BAM files into a single BAM file May 19 '17
12 Can open-source software be peer-reviewed and published? Feb 5
View all questions and answers →

Badges (66)

Gold

2

Rarest

Silver

20

Rarest

Bronze

44

Rarest

View all badges →