Timeline for How to compare groups using WGS data?
Current License: CC BY-SA 3.0
7 events
| when toggle format | what | by | license | comment | |
|---|---|---|---|---|---|
| Jun 6, 2017 at 15:26 | answer | added | morgantaschuk | timeline score: 2 | |
| Jun 5, 2017 at 21:16 | answer | added | gringer♦ | timeline score: 2 | |
| Jun 5, 2017 at 20:57 | comment | added | Kamil S Jaron | Sounds like you would like to do GWAS, but for that you would probably need way more samples. Can you subset your variants to test only relevant regions of genome? That would help you to get a statistical power (less tests -> better). | |
| Jun 5, 2017 at 19:36 | comment | added | gringer♦ | Hi Jessica, thanks for writing a question up for Bioinformatics Stack Exchange. Your question fits well with the format we like on this site, in that it is specific to a particular task, and includes a bit of a story behind it. If you would like to improve the quality of answers for this question, my suggestion would be to add in information about what types of analyses you are already familiar or comfortable with. Have you used GATK or R before? Is this a diagnostic setting, where a structured, documented, and replicable analysis is important? | |
| Jun 5, 2017 at 18:11 | comment | added | Devon Ryan | Is that really what you're interested in, or would you rather find likely causative differences? | |
| Jun 5, 2017 at 18:09 | review | First posts | |||
| Jun 6, 2017 at 16:36 | |||||
| Jun 5, 2017 at 18:06 | history | asked | jessica | CC BY-SA 3.0 |