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Tagged with rna-splicing gtf
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On the same strand, for the same gene, can exons be overlapping?
I want to get a set of exon regions for each protein coding gene.
I extracted a set of relevant information (chromosome, start, end, gene ID, gene name, gene type, exon number and exon ID) from a GTF ...
4
votes
1
answer
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How to represent trans-spliced genes in GTF?
For example, see this gene (nad1) in ENA:
http://www.ebi.ac.uk/ena/data/view/ABI60879
If you look at the XML for that gene you see the following:
...