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A python-based scripting language to visualise 3-D structures, especially of proteins.
1
vote
PyMol alignment script
To use it, in your console type pymol -cq this_script_name.py.
You need to have pymol installed and accessed via console. … Easiest way I found to manage it is to create a new environment via conda and install pymol there.
import pymol
def super_prots(prot_1, prot_2):
pymol.cmd.fetch(prot_1, 'prot_1')
pymol.cmd.fetch …