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Is there any difference between SNPs 'AG' and 'GA' in association analyses?

Could you please show us the context in which this appears, as you seem to be interpreting this differently to Devon. If it's appearing as you say, GA and AG, then Devon is right, this usually means …
Emily_Ensembl's user avatar
2 votes

HG19 Position meaning

Yes, they are base pair positions
Emily_Ensembl's user avatar