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Please supplement your question with a minimal reproducible example. Use dput() for data and specify all non-base packages with library calls. For statistical questions please use http://stats.stackexchange.com.

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Linking UK biobank patient IDs with their corresponding genetic data

I am analyzing ukbb data and I have patient IDs for both cases and controls. Now I want the genetic data of all patients based on their IDs. I am trying to test with chromosome 5 as I have both bgen a …
Muhammad's user avatar
2 votes
0 answers
93 views

Mapping ICD9 codes in UKBB data to PheCodes using PheWAS package

I am using CreatePhewasTable function in R for the conversion. … I am sharing my R script library(data.table) library(dplyr) library(PheWAS) icdt <- fread("icd_codes.tab",header=T,sep="\t") icdt <- as.data.frame(icdt) for (i in 215:261) { icd9 <- data.frame(matrix …
Muhammad's user avatar