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Results tagged with pdb
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user 14439
A file format used in structural biology to describe the 3-D coordinates of atoms of a biological structure, often a protein. Can also refer to the Protein Data Bank database, which stores all the submitted biological structures, most of which were obtained using X-ray crystallography.
1
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0
answers
267
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getting PDB file of interested sequence
Do you think, I can generate PDB file by using this link http://www.scfbio-iitd.res.in/software/drugdesign/bdna.jsp
I did generate the PDB file using the above site. … How can I get the pdb file of the DNA sequence I want from protein data bank, I did search it but did not find the one I want. Is it a way to extract the PDB file? …
1
vote
2
answers
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Generating PDB file for custom DNA sequence
Do you think, I can generate PDB file by using this link http://www.scfbio-iitd.res.in/software/drugdesign/bdna.jsp
How can I get the pdb file of the DNA sequence I want from protein data bank, I did search … Is it a way to extract the PDB file?
What are other methods I can use to generate PDB file of B-DNA sequence?
Thank you for your time. …
0
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1
answer
142
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Help me in understanding the PDB file
"We took the structure and coordinates of nogalamycin
from the X-ray structure determined in PDB code = 1D17"
What do I need to download from there....a pdb file or what?
Thank you …