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This refers to parts of or whole transcripts (or occasionally genes) that are not translated into proteins.

1 vote
1 answer
45 views

Statistical methods suitable for DE analysis of non coding RNAs

I am currently working on DE analysis of coding as well as non-coding features of A. thaliana using the edgeR package. Is the negative binomial method that is normally used for the DE analysis of gene …
Arkajyoti Banerjee's user avatar
1 vote
1 answer
78 views

Filtering criteria for non-coding features with very low counts

I am trying to do DE analysis of non-coding features of A. thaliana. I find in the miRNA and lncRNA counts file that they are abundant in zero counts, and most of the non-zero counts are very low. Now …
Arkajyoti Banerjee's user avatar