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Results tagged with plink
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user 920
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PLINK clump behavior on missing SNPs?
Clearly, PLINK can't estimate the LD for SNPs that aren't found in the reference, and most likely just ignores them. … Then again, you can skip PLINK and try searching for SNP prioritization methods based on summary statistics - it's an area of active development, and something might be available to suit your needs. …
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