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Results tagged with pymol
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user 9572
A python-based scripting language to visualise 3-D structures, especially of proteins.
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Using dssp after chain extraction
For the single chain extraction I tried several methods, such as:
import pymol2
for entry in list:
with pymol2.PyMOL() as pymol:
pymol.cmd.fetch(entry)
pymol.cmd.save(entry + '.cif' … This is the first line of the coordinates from the biopython/pymol file:
ATOM 1 N N . GLY A ? 1 ? …
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