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Bioinformatics
Zebra Fish's user avatar
Zebra Fish's user avatar
Zebra Fish's user avatar
Zebra Fish
  • Member for 2 years, 5 months
  • Last seen more than a week ago
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question
3
Command line based interaction with the UCSC genome browser, automated data upload and track generation
Nov 29, 2022
question
3
STAR vs Bowtie2
Aug 14, 2022
question
2
converting coordinates to sequences using bedtools getfasta - [segmentation fault] errors
Oct 25, 2022
question
2
How to identify genomic regions / peaks associated with enhancers (TF binding sites)? Is there a tool or a formal recipe?
Jul 20, 2022
question
2
PWM (4xM matrices) to Sequence Logo Visualizations in MATLAB or Python
Jul 22, 2022
question
1
Tool for cross referencing a newly found MOTIF to database of known MOTIFS
Aug 3, 2022
question
1
Common tools for generating results and visualizations for bioinformatics and genomics publications
Jul 17, 2022
question
1
Converting Chip-seq fastq format ({$x_k$} list of seq segments) to genome browser {sequence $x_i$, count-number $y_i$} format
Jul 18, 2022
question
1
How to extract DNA sequence from browser track input files (BigWig, bed etc.) files
Jul 19, 2022
question
1
How much of the space of motifs have been discovered?
Apr 13, 2023