3 votes
Accepted

Visualize PLINK pedigree files

We use kinship2 R package to visualize pedigree files (.fam plink files). For some reasons, some characters from plink ped aren't supported (like "-9" for unknown ...
Eric C.'s user avatar
  • 208
2 votes

Finding linkage disequilibrium when I have a kinship matrix but not pedigree

I originally thought you were working on humans. I spotted "non model organism", that changes things alot, albeit I guess humans are a non-model organism in a way. The question is what the ...
M__'s user avatar
  • 12.3k

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