I am running into an error when I tried to run the following lines of code, the
error at line 3:
1 from rpy2.robjects.packages import importr 2 base = importr('base') 3 base.source("http://www.bioconductor.org/biocLite.R") 4 biocinstaller = importr("BiocInstaller") 5 biocinstaller.biocLite("seqLogo")
rpy2.rinterface_lib.embedded.RRuntimeError: Error: With R version 3.5 or greater, install Bioconductor packages using BiocManager; see https://bioconductor.org/install
How can I use
BiocManager installer instead of
biocLite and reflect that on my code? I couldn't find any documentation or source that talk about this error from within Python.
Thank you in advance