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user 10037
2
votes
0
answers
72
views
Why do I obtain different output results with blast vs awk commands
I have an awk command that identifies 30 pb from two multifasta files.
When I used two input files:
E.g. 100 sequences each, I get the same result with the awk command and blastn command.
E.g. with 1 …
- 41
1
vote
1
answer
83
views
Metagenome simulation from a concatenated FASTA file
I am trying to simulate metagenome sequencing. So I will start with a file with a lot of concatenated genomes. From there, I would like to randomly extract 10,000 sequences of length 200bps.
I got hel …
- 41