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Results tagged with sequence-analysis
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user 12126
Umbrella term for understanding any given nucleic acid sequence code, either as a locus, loci or genome with itself or as a comparison to comparable nucleic acid sequence code either intraspecifically or interspecifically
1
vote
Accepted
How to Read SCF file in Python?
It was done using sangerseqR with rpy2 in python
import rpy2.robjects as r
from rpy2.robjects.packages import importr
utils = importr('utils')
utils.install_packages('sangerseqR', repo …
- 151
1
vote
1
answer
390
views
Where to find publicly available Sanger chromatography data?
I am looking for any public available databases where I can download Sanger chromatography data ideally in Ab1 or SCF file format. I need extremely large amounts of this, since I want to use it for ma …
- 151
0
votes
1
answer
265
views
How to Read SCF file in Python?
Is there any way that I can read SCF file in python like in R using sangerseqR, I have tried with Biopython, it seems it does not support this format.
- 151
2
votes
Accepted
Where to find publicly available Sanger chromatography data?
NCBI Trace Archive
The NCBI Trace Archive is a permanent repository of DNA sequence chromatograms (traces), base calls, and quality estimates for single-pass reads from various large-scale sequencing …
- 151