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A python-based scripting language to visualise 3-D structures, especially of proteins.
1
vote
Combine structures in the same session - PyMOL
Open the PyMOL session.
Use the load command to load your PDB file(s): load file.pdb.
Use the align or super commands to overlay structures, e.g. align prot1, prot2. …
5
votes
Accepted
PDB file downloading: pymol automation vs. manual
Don't do it in PyMol and instead use the Biopython structure downloader (http://biopython.org/DIST/docs/tutorial/Tutorial.html#htoc187). …