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A python-based scripting language to visualise 3-D structures, especially of proteins.

1 vote

Combine structures in the same session - PyMOL

Open the PyMOL session. Use the load command to load your PDB file(s): load file.pdb. Use the align or super commands to overlay structures, e.g. align prot1, prot2. …
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5 votes
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PDB file downloading: pymol automation vs. manual

Don't do it in PyMol and instead use the Biopython structure downloader (http://biopython.org/DIST/docs/tutorial/Tutorial.html#htoc187). …
jgreener's user avatar
  • 951