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Results tagged with deeptools
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user 8543
1
vote
1
answer
239
views
merge the matrix from computematrix of deeptools
I have several matrix from computematrix of deeptools. …
- 125
2
votes
1
answer
36
views
How to calculate the number of peaks that are upstream/downstream of some other peaks
I have 3 histone marks,I have used Macs2 for peak calling and diffBind to analyze the peaks. I was wondering if you know any way to calculate the peak numbers of one specific histone mark that occur f …
- 125
1
vote
1
answer
302
views
plot correlation between several bam files
First I used multiBamSummary from deeptools to merge all the bam files based on bi/bed. Now when I am using the plotCorrelation I do not get any file. …
- 125