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Phylogenetics is the study of evolutionary relationships among biological entities - often species, individuals or genes.
1
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DiffBind, diffferentially binding site
I got the answer from Rory Stark. the samples should have a unique ID. (https://support.bioconductor.org/p/132502/#132514)
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DiffBind, diffferentially binding site
I have data for 3 histone marks (2 for silencing and 1 for activation) each mark has three replicates.
when I run the diffBind package I have three contrast:
Silence1-Activation
Silence1-Silence2
Sile …